Skip to content

Pull requests: scverse/rustar-aligner

New pull request New
15 Open 30 Closed
15 Open 30 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

chore: unify parsing and validation
#64 opened May 16, 2026 by flying-sheep Member Loading…
fix(stats): route reads exceeding --outFilterMultimapNmax to too_many_loci counter
#54 opened May 12, 2026 by pinin4fjords Contributor Loading…
6 tasks done
1
1
fix(stitch): use sjdb_score in place of motif_score on annotated junctions
#52 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
fix: decode Gsj-region SA hits into split splice seeds
#51 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
1
fix(stats): route no-seeds-no-clusters reads to UnmappedReason::Other
#49 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
1
fix(sjdb): key SpliceJunctionDb in genome-absolute 0-based coordinates
#45 opened May 12, 2026 by pinin4fjords Contributor Loading…
6 tasks done
1
1
fix(output): move pass-1 SJ tab into <prefix>_STARpass1/SJ.out.tab
#44 opened May 12, 2026 by pinin4fjords Contributor Loading…
6 tasks done
1
1
feat(bam): emit XS:A: strand tag when --outSAMstrandField intronMotif
#43 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
1
fix(bam): emit SAM-spec NM:i: tag distinct from STAR-internal nM:i:
#42 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
1
fix(transcriptome-bam): populate mate fields on paired-end records
#41 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
1
feat(bam): populate @PG header with PN/VN/CL fields
#40 opened May 12, 2026 by pinin4fjords Contributor Loading…
6 tasks done
1
1
fix(transcriptome-bam): write per-record RG:Z: tag matching @RG header
#39 opened May 12, 2026 by pinin4fjords Contributor Loading…
6 tasks done
1
1
fix(bam): subtract Phred+33 offset from QUAL before writing to BAM
#38 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
1
fix(chimeric): create output parent directory before writing
#37 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
2
feat(params): accept --limitGenomeGenerateRAM for STAR CLI compatibility
#36 opened May 12, 2026 by pinin4fjords Contributor Loading…
5 tasks done
1
2
ProTip! Mix and match filters to narrow down what you’re looking for.