Nowcasting and forecasting infectious disease dynamics

Note

This course is now taught as two standalone courses.

• Nowcasting (first half of the week): https://github.com/nfidd/sismid-nowcasting
• Forecasting & evaluation (second half of the week): https://github.com/nfidd/sismid-forecasting

This repository is now an umbrella landing page linking to both. The original combined materials are preserved as the v1.0.0 release and remain browsable in the sidebar.

This repository contains the material to create the nfidd sismid course page.

All the raw material is in the folder sessions/ and is written in quarto. Any changes to the quarto files are automatically updated on the web site once committed to the main branch.

To add a lesson, add a .qmd file in the sessions folder with a YAML field order: corresponding to where it fits in, and edit sessions.qmd to add it to the schedule.

Local testing

The html pages can be generated locally using the function

quarto::quarto_render()

Contributors

All contributions to this project are gratefully acknowledged using the allcontributors package following the all-contributors specification. Contributions of any kind are welcome!

Code

sbfnk, seabbs, kathsherratt, nickreich, github-actions[bot], dependabot[bot], jamesmbaazam, ManuelStapper, zsusswein

Issues

trobacker