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Pull requests: nf-core/rnaseq

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Pull requests list

Pass --skip-dup-check to RustQC when --with_umi is set
#1882 opened Jul 6, 2026 by FelixKrueger Contributor • Draft
1
Fix: Make CUSTOM_RSEMMERGECOUNTS input deterministic to improve caching
#1880 opened Jul 2, 2026 by kanishkanandhkumar Loading…
2
docs(metro): add process mappings and re-render with nf-metro 1.0
#1876 opened Jun 26, 2026 by pinin4fjords Member Loading…
1
Deterministic tx2gene sample selection in quant_tximport_summarizedexperiment
#1875 opened Jun 25, 2026 by pinin4fjords Member Loading…
5 tasks done
3
Consolidate and harden PR-comment GitHub Actions workflows
#1872 opened Jun 22, 2026 by ewels Member • Draft
2
test(rustqc): validate noodles-migration build via pinned dev container
#1868 opened Jun 16, 2026 by ewels Member • Draft
1
feat(rustar): wire rustar-aligner as opt-in STAR drop-in
#1855 opened May 12, 2026 by pinin4fjords Member • Draft
4 of 5 tasks
1
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