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Blocks - #35

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ZoeLeibowitz wants to merge 111 commits into

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Draft

Blocks#35
ZoeLeibowitz wants to merge 111 commits into
masterfrom
blocks

Commits on Oct 14, 2024
- compiler: Add FuncPtrCall
  ZoeLeibowitz
  committed
  0b92950
- misc: Update docstring
  ZoeLeibowitz
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  ceba1b9
- compiler: Edit names, move position of Callback and other small edits
  ZoeLeibowitz
  committed
  1c8ef94
- misc: Update docstring for Callback
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  committed
  1d6c21e
- misc: Clean up blank lines
  ZoeLeibowitz
  committed
  1b50fc7
- misc: Split Dockerfile.cpu into .cpu and .intel
  
  FabioLuporini
  authored and
  ZoeLeibowitz
  committed
  dd3b021
- try petscfunc from abstractfunc
  ZoeLeibowitz
  committed
  8302ea1
- latest.
  ZoeLeibowitz
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  e7e5c5f
- remove data allignment
  ZoeLeibowitz
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  5fa3ba7
- new petsc types
  ZoeLeibowitz
  committed
  09dbaec
- add const func in petscfunction
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  committed
  b2202c5
- dsl: Simplify PETScFunction class and add diff dtypes inside test_petsc_functions
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  committed
  2063c1d
- dsl: Inherit from DiscreteFunction for PETScFunction instead?'
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  committed
  a5dbdc7
- compiler: Switch PETScFunction to inherit from Array
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  3592bf7
- compiler: Edit PETScFunction to inherit from ArrayBasic
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  8b80d5b
- misc: Fix pytest for test_petsc.py
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  d557f96
- compiler: Edit _C_ctype property of PETScFunction to utilise CustomDtype
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  ffc0503
- compiler: Edit _C_ctype property of PETScFunction
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  committed
  5e292ad
- misc: Update file due to incorrect rebase
  ZoeLeibowitz
  committed
  71d109c
- compiler: Change name to PETScArray from PETScFunction
  ZoeLeibowitz
  committed
  17e8570
- compiler: Add intermediate class between PETScArray and ArrayBasic
  ZoeLeibowitz
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  e5df434
- compiler: Remove PETSc specific checks in place_definitions
  ZoeLeibowitz
  committed
  c56405f
- compiler: Remove PETSc specific check from place_definitions and edit PETScArray
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  ee12a33
- compiler: Remove is_PETScArray
  ZoeLeibowitz
  committed
  651885a
- compiler: Remove elif is_ObjectArray and use alloc_object_.. inside the else statement
  ZoeLeibowitz
  committed
  43bbdca
- misc: Delete empty file
  ZoeLeibowitz
  committed
  4dcc4b9
- misc: Move dtype_to_petsctype to petsc.py and clean up blank lines
  ZoeLeibowitz
  committed
  f1b31a2
- misc: Clean up blank line
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  committed
  9aec979
- Update nodes.py
  ZoeLeibowitz
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  866ac5f
- Update nodes.py
  ZoeLeibowitz
  committed
  16028ad
- compiler: Add FuncPtrCall
  ZoeLeibowitz
  committed
  34ea750
- compiler: Edit names, move position of Callback and other small edits
  ZoeLeibowitz
  committed
  dd2a906
- types: Update PETScArray to have liveness
  ZoeLeibowitz
  committed
  54c21de
- compiler: Switch get to pop in PETScArray
  ZoeLeibowitz
  committed
  978cd38
- types: Move liveness to ArrayBasic from PETScArray
  ZoeLeibowitz
  committed
  77a0d0b
- misc: clean
  ZoeLeibowitz
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  fe08af8
- types: Make PETScArrays differentiable
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  committed
  4cae443
- types: Introduce PETScFunction class to enable differentiablity and therefore compatability with Function substitutions
  ZoeLeibowitz
  committed
  aa0a27e
- types: Update PETScArray
  ZoeLeibowitz
  committed
  850d5c0
- types: Edit init file for petsc types
  ZoeLeibowitz
  committed
  d74b316
- revert file messed up rebase
  ZoeLeibowitz
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  504ee2e
- types: Add coefficients arg to PETScArray
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  committed
  4203481
- types: Add basic PETScEq
  ZoeLeibowitz
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  61c0404
- types: Add PETScSolve and simple iet pass
  ZoeLeibowitz
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  cd95a1e
- tests: Add test for PETScSolve
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  committed
  73f714f
- misc: Clean
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  committed
  0275205
- misc: Clean up
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  committed
  b341fea
- misc: Add a comment in types/petsc.py
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  committed
  4c0fb93
- types: Update PETScEq default solver params
  ZoeLeibowitz
  committed
  2b8309c
- types: Remove hasattr from LoweredEq, create common node class for petsc exprs and edit iteration check in clsuter.py
  ZoeLeibowitz
  committed
  ca6a96a
- compiler: Edit iteration bound check in cluster.py i.e change PETScArray isinstance check to ArrayBasic
  ZoeLeibowitz
  committed
  de8c6c4
- compiler: Remove deep nesting in cluster.py isinstance check for ArrayBasic
  ZoeLeibowitz
  committed
  37bb900
- compiler: Replace additions in LoweredEq with PETScRHS class which is a subclass of sympy.Expr - used to track target/solver_params through operator lowering
  ZoeLeibowitz
  committed
  fc37305
- misc: Clean
  ZoeLeibowitz
  committed
  b8efafd
- compiler: Remove target and solver params from LinearSolverExpression
  ZoeLeibowitz
  committed
  4268b47
- compiler: Reduce elif statements inside iet/algorithms by using a PETSc mapper
  ZoeLeibowitz
  committed
  c13181d
- types: Change name from PETScRHS to LinearSolveExpr
  ZoeLeibowitz
  committed
  d875a9d
- types: Edit LinearSolveExpr
  ZoeLeibowitz
  committed
  206f84e
- compiler: Small edit in LinearSolveExpr
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  committed
  ad70691
- compiler: Small edit to hash in LinearSolveExpr
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  committed
  d3f52db
- compiler: Remove function from iet/algorithms and replace with just the mapper
  ZoeLeibowitz
  committed
  ea36ecf
- compiler: Remove unecessary __init__ from LinearSolverExpression
  ZoeLeibowitz
  committed
  2035333
- compiler: Remove printer for LinearSolveExpr
  ZoeLeibowitz
  committed
  6370848
- misc: Clean up
  ZoeLeibowitz
  committed
  6734a2d
- compiler: Edit PETScArrays to support devito multi-dim indexing
  ZoeLeibowitz
  committed
  acf2327
- misc: clean
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  a1fa4dd
- tests: Add test for no automatic cast generation with PETScArrays
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  b10beaf
- misc: Docstring edit in test petsc
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  07f8e99
- compiler: Add PETScIndexedData
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  committed
  b700c43
- misc: Clean
  ZoeLeibowitz
  committed
  ddc36c4
- compiler: Add indexedbases back and simplify PETScArray symbolic shape
  ZoeLeibowitz
  committed
  4a7e436
- types: Reverse dmda and therefore casting to match Devito
  ZoeLeibowitz
  committed
  db50cc5
- misc: Doc
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  2a4886a
- misc: Add line back
  ZoeLeibowitz
  committed
  9cc79df
- compiler: Add Mock/placeholder expressions to create distinct iteration loops for each component of a linear solve
  ZoeLeibowitz
  committed
  bc082ae
- misc: Clean up
  ZoeLeibowitz
  committed
  13e1f29
- bench: Remove null profiled sections in Kernel for openmp
  ZoeLeibowitz
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  019d1c6
- compiler: Remove init=False from LinSolveMock
  ZoeLeibowitz
  committed
  cbea467
- compiler: Simplify by just having a Mock RHS which drops corresponding Cluster before IET level
  ZoeLeibowitz
  committed
  d9c6fcd
- misc: Clean up
  ZoeLeibowitz
  committed
  0d1325c
- misc: Clean
  ZoeLeibowitz
  committed
  b22cd37
- misc: Comments
  ZoeLeibowitz
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  5a869b5
- misc: Typo
  ZoeLeibowitz
  committed
  cf8e9c1
- compiler: Lift iteration space instead of using new Mock object
  ZoeLeibowitz
  committed
  20416b7
- misc: Clean
  ZoeLeibowitz
  committed
  59f38b7
- misc: Clean
  ZoeLeibowitz
  committed
  0465168
- misc: Clean
  ZoeLeibowitz
  committed
  c6230dd
- compiler: Move petsc lift to petsc only file
  ZoeLeibowitz
  committed
  536e139
- types: Simplify petsc_lift
  ZoeLeibowitz
  committed
  3a5f0a2
- types: Add else to petsc_lift
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  committed
  4824e40
- misc: Move petsc_lift to passes/clusters file
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  committed
  c49033d
- compiler: Move petsc_lift to after clusterize inside lower_clusters
  ZoeLeibowitz
  committed
  1f245e7
- misc: Fix functools
  ZoeLeibowitz
  committed
  73d1083
- misc: Split Dockerfile.cpu into .cpu and .intel
  
  FabioLuporini
  authored and
  ZoeLeibowitz
  committed
  e2d7321
- misc: Update file due to incorrect rebase
  ZoeLeibowitz
  committed
  f4d9c6a
- dsl: Dispatch to sympy.Add not both Add and EvalDerivative
  ZoeLeibowitz
  committed
  eb58f3c
- compiler: Create mixin for ThreadCallable and PETScCallable
  ZoeLeibowitz
  committed
  f229935
- compiler: Don't ever generate time loop for petsc callbacks
  ZoeLeibowitz
  committed
  0f9bb9b
- compiler: Move passes from utils into passes and create petsc_preprocess
  ZoeLeibowitz
  committed
  f5b0746
- misc: Remove workflow triggers
  ZoeLeibowitz
  committed
  07a27bf
- rebase leftover
  ZoeLeibowitz
  committed
  7ad60cc
Commits on Oct 16, 2024
- Merge branch 'devitocodes:master' into master
  ZoeLeibowitz
  authored
  469e464
Commits on Oct 17, 2024
- dsl: Edit PETScSolve to support modified stencils
  ZoeLeibowitz
  committed
  95bda78
- dsl: Map time indices after forming eqn sets
  ZoeLeibowitz
  committed
  44d1ae3
Commits on Oct 20, 2024
- dsl: Simplify index extraction
  ZoeLeibowitz
  committed
  97c0d52
Commits on Oct 25, 2024
- Merge branch 'devitocodes:master' into master
  ZoeLeibowitz
  authored
  2ecf48a
Commits on Nov 11, 2024
- Merge branch 'devitocodes:master' into master
  ZoeLeibowitz
  authored
  49b41ee
Commits on Nov 12, 2024
- Merge pull request #31 from ZoeLeibowitz/modifed_stencil
  ZoeLeibowitz
  authored
  1b239da
Commits on Dec 13, 2024
- snes ex19 matfree jac
  ZoeLeibowitz
  committed
  6e9f6da
Commits on Dec 16, 2024
- examples: Use vecgetsubvector
  ZoeLeibowitz
  committed
  370d647
- update matfree
  ZoeLeibowitz
  committed
  185d5ba

Commits

Commits on Oct 14, 2024

Commits on Oct 16, 2024

Commits on Oct 17, 2024

Commits on Oct 20, 2024

Commits on Oct 25, 2024

Commits on Nov 11, 2024

Commits on Nov 12, 2024

Commits on Dec 13, 2024

Commits on Dec 16, 2024