Type-check rfd3na utils.inference / hbonds / na_geom_utils#351

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lyskov-ai:0076-rfd3na-mypy-utils-hbonds-nageom

Commits on Jul 7, 2026

Bring rfd3 FabricTrainer under the mypy type-check gate

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Bring rfd3 legacy_input_parsing under the mypy type-check gate

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Clear the final rfd3 modules from the mypy ratchet (engine, vizualize)

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Bring models/mpnn into the mypy gate behind an ignore_errors ratchet

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Wire mpnn's CPU-portable tests into the pytest gate

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Clear the small-tier mpnn modules from the mypy ratchet

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Clear the inference/pipeline-glue mpnn modules from the mypy ratchet

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Clear the mpnn feature-collator and train modules from the mypy ratchet

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Clear mpnn.utils.weights from the mypy ratchet

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Type-check mpnn.utils.inference; fully clear the mpnn mypy ratchet

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Bring models/rfd3na into the mypy gate behind an ignore_errors ratchet

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Clear the 1-error-tier rfd3na modules from the mypy ratchet

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Clear the 2-3-error-tier rfd3na modules from the mypy ratchet

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Clear the io / trainer-utils / dump / run_inference rfd3na modules from the ratchet

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Clear the na_geom / pipelines / design_transforms / RFD3 rfd3na modules

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Clear the engine / inference_sampler / trainer rfd3na modules from the ratchet

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Clear the utils.inference / hbonds / na_geom_utils rfd3na modules

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Type-check rfd3na utils.inference / hbonds / na_geom_utils#351

Type-check rfd3na utils.inference / hbonds / na_geom_utils#351
lyskov-ai wants to merge 17 commits into
RosettaCommons:productionfrom
lyskov-ai:0076-rfd3na-mypy-utils-hbonds-nageom

Commits on Jul 7, 2026

Bring rfd3 FabricTrainer under the mypy type-check gate

Bring rfd3 legacy_input_parsing under the mypy type-check gate

Clear the final rfd3 modules from the mypy ratchet (engine, vizualize)

Bring models/mpnn into the mypy gate behind an ignore_errors ratchet

Wire mpnn's CPU-portable tests into the pytest gate

Clear the small-tier mpnn modules from the mypy ratchet

Clear the inference/pipeline-glue mpnn modules from the mypy ratchet

Clear the mpnn feature-collator and train modules from the mypy ratchet

Clear mpnn.utils.weights from the mypy ratchet

Type-check mpnn.utils.inference; fully clear the mpnn mypy ratchet

Bring models/rfd3na into the mypy gate behind an ignore_errors ratchet

Clear the 1-error-tier rfd3na modules from the mypy ratchet

Clear the 2-3-error-tier rfd3na modules from the mypy ratchet

Clear the io / trainer-utils / dump / run_inference rfd3na modules from the ratchet

Clear the na_geom / pipelines / design_transforms / RFD3 rfd3na modules

Clear the engine / inference_sampler / trainer rfd3na modules from the ratchet

Clear the utils.inference / hbonds / na_geom_utils rfd3na modules