Release 1.2.0: iLIS interface score + positives-only slider calibration#18
Merged
Conversation
- Add iLIS (AFM-LIS) interface score: sqrt(LIS * cLIS), emitting interface_cLIS / interface_iLIS in the per-run CSV. - Calibrate percentile sliders and meta-score on positive (interacting) benchmark pairs only; drop the report slider poly-line. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Bumps
alphajudgeto 1.2.0 and adds a CHANGELOG entry for the two functional commits already on main (3f5ec10,45dc059).What's in this release
iLIS = sqrt(LIS * cLIS), wherecLISis the LIS PAE transform averaged only over residue pairs in direct contact. Emitsinterface_cLIS/interface_iLISin the per-run CSV; validated against the official AFM-LISlis.pyto 4 decimals.interface_meta_scoreAUROC = 0.878. The report slider poly-line is dropped.Validation
pytest -n auto --dist loadfile, BLAS threads capped).🤖 Generated with Claude Code