Skip to content

Allow retrieving OMArk version from the CLI #52

Description

@OlivierCoen

Hi,

I am currently revamping the nf-core/genomeannotator pipeline, and I'd like to integrate OMArk in it. Ideally, it would be nice to be able to get the OMArk version directly through a command like omark --version, in order to expose which version of the tool was used in a pipeline run.

Do you think that you could do it?

Thanks in advance!

Activity

  1. YanNevers commented on Jun 18, 2026

    @YanNevers
    Collaborator

    Dear @OlivierCoen ,

    Thank you for the request. I plan to work on adding this feature shortly, and it should be available within the next week.
    I will let you know when it is released.

    Best wishes,
    Yannis Nevers

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions